Nice to see another SJ rider in the StL area!
It all depends on what your goals are here. My buddy was recently in the same situation with his 1990 Superjet...he wanted to go bigger, but didn't want to do it with the 650 platform.
He ended up throwing a 61x 701 motor in there and building from that point. If you look around, you can find an older sitdown yamaha ski(or also a mastercraft..they have 701s in them) with a 701 in it and swap motors around...then sell the 650 for what you gave for the entire spare parts ski. Then from that point, throw a pipe, head and other parts on for a nice power increase.
However if you decide to keep your 650, I see no need in replacing ANY gaskets. Gaskets aren't really a regular maintenance type deal...Only time they need replaced is if you are either having issues(blown head gasket) or if you for some reason pull the motor apart. If your motor has good compression(which it appears it does), then don't worry about it.
Instead make sure you have a good electric bilge pump(one of the best mods you can have on a SJ) and maybe do some other mods such as aftermarket intake grate and ride plate. Also do general maintenance such as greasing your midshaft. Don't forget to winterize of course..