OK, Your not quite getting this...The YA7640L domes have .015 step in the dome for piston to dome clearance, with a stock engine the piston is approximately .030 negative deck height (piston in down in the hole a TDC) this will yield about .045 squish clearance.
If you try and use the YA7640L50 this dome has the squish cut step .050 and not the normal L spec at .015. This dome was custom cut for a stroker crank (with a positive piston deck height) OR like I like to do with 760 cylinder to make a lot better freestyle power is to mill the bottom of cylinder to lower the port timing. This makes the piston a positive deck height, so you need to use a cut out deeper squish in the dome.
When setting up domes and heads, you must set the squish clearance 1st, then figure in what squish ratio you want, then compression last with machining the bowl to final compression ratio.
It's not quite that easy, but gives you the idea what it take to design and build domes.